Cluster: HRGMv2_3339_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3339
- CGC Family ID: CGCFAM_05868
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3339_20 | HRGMv2_3339_20_8 | 6394 | 7536 | + | 2.A.6.2.47 |
| TC | HRGMv2_3339_20 | HRGMv2_3339_20_9 | 7547 | 12034 | + | 2.A.6.2.15 |
| NULL(UNKNOWN) | HRGMv2_3339_20 | HRGMv2_3339_20_10 | 12316 | 12903 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3339_20 | HRGMv2_3339_20_11 | 12995 | 14692 | + | GH103 |
Gene ID: HRGMv2_3339_20_8
Type: TC
Location: 6394 - 7536 (+)
Type: TC
Location: 6394 - 7536 (+)
Gene ID: HRGMv2_3339_20_9
Type: TC
Location: 7547 - 12034 (+)
Type: TC
Location: 7547 - 12034 (+)
Gene ID: HRGMv2_3339_20_10
Type:
Location: 12316 - 12903 (+)
Type:
Location: 12316 - 12903 (+)
Gene ID: HRGMv2_3339_20_11
Type: CAZyme
Location: 12995 - 14692 (+)
Type: CAZyme
Location: 12995 - 14692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
CAKQWA01
Species
CAKQWA01 sp934277945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.