Cluster: HRGMv2_3333_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3333
- CGC Family ID: CGCFAM_05138
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3333_1 | HRGMv2_3333_1_141 | 144857 | 145783 | - | GT9 |
| CAZyme | HRGMv2_3333_1 | HRGMv2_3333_1_142 | 145780 | 146703 | - | GT10 |
| pfam | HRGMv2_3333_1 | HRGMv2_3333_1_143 | 146785 | 147600 | - | adh_short | adh_short_C2 |
| peptidase | HRGMv2_3333_1 | HRGMv2_3333_1_144 | 147716 | 149989 | + | U32.UPW |
| TC | HRGMv2_3333_1 | HRGMv2_3333_1_145 | 150752 | 151324 | - | 4.F.1.1.8 |
Gene ID: HRGMv2_3333_1_141
Type: CAZyme
Location: 144857 - 145783 (-)
Type: CAZyme
Location: 144857 - 145783 (-)
Gene ID: HRGMv2_3333_1_142
Type: CAZyme
Location: 145780 - 146703 (-)
Type: CAZyme
Location: 145780 - 146703 (-)
Gene ID: HRGMv2_3333_1_143
Type: pfam
Location: 146785 - 147600 (-)
Type: pfam
Location: 146785 - 147600 (-)
Gene ID: HRGMv2_3333_1_144
Type: peptidase
Location: 147716 - 149989 (+)
Type: peptidase
Location: 147716 - 149989 (+)
Gene ID: HRGMv2_3333_1_145
Type: TC
Location: 150752 - 151324 (-)
Type: TC
Location: 150752 - 151324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
CAAHEQ01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.