Cluster: HRGMv2_3331_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3331
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3331_19 | HRGMv2_3331_19_20 | 23283 | 24332 | + | GH3 |
| TC | HRGMv2_3331_19 | HRGMv2_3331_19_21 | 24319 | 25206 | + | 9.B.149.1.11 |
| pfam | HRGMv2_3331_19 | HRGMv2_3331_19_22 | 25210 | 25470 | + | TatA_B_E |
| TC | HRGMv2_3331_19 | HRGMv2_3331_19_23 | 25460 | 26266 | + | 2.A.64.1.3 |
Gene ID: HRGMv2_3331_19_20
Type: CAZyme
Location: 23283 - 24332 (+)
Type: CAZyme
Location: 23283 - 24332 (+)
Gene ID: HRGMv2_3331_19_21
Type: TC
Location: 24319 - 25206 (+)
Type: TC
Location: 24319 - 25206 (+)
Gene ID: HRGMv2_3331_19_22
Type: pfam
Location: 25210 - 25470 (+)
Type: pfam
Location: 25210 - 25470 (+)
Gene ID: HRGMv2_3331_19_23
Type: TC
Location: 25460 - 26266 (+)
Type: TC
Location: 25460 - 26266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp900768185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.