Cluster: HRGMv2_3331_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3331
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3331_3 | HRGMv2_3331_3_95 | 98593 | 101271 | - | 4.A.2.1.17 |
| pfam | HRGMv2_3331_3 | HRGMv2_3331_3_96 | 101289 | 103442 | - | tRNA_synt_2f | DALR_1 |
| pfam | HRGMv2_3331_3 | HRGMv2_3331_3_97 | 103447 | 104328 | - | tRNA-synt_2e |
| CAZyme | HRGMv2_3331_3 | HRGMv2_3331_3_98 | 104498 | 105394 | + | GT2 |
Gene ID: HRGMv2_3331_3_95
Type: TC
Location: 98593 - 101271 (-)
Type: TC
Location: 98593 - 101271 (-)
Gene ID: HRGMv2_3331_3_96
Type: pfam
Location: 101289 - 103442 (-)
Type: pfam
Location: 101289 - 103442 (-)
Gene ID: HRGMv2_3331_3_97
Type: pfam
Location: 103447 - 104328 (-)
Type: pfam
Location: 103447 - 104328 (-)
Gene ID: HRGMv2_3331_3_98
Type: CAZyme
Location: 104498 - 105394 (+)
Type: CAZyme
Location: 104498 - 105394 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp900768185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.