Cluster: HRGMv2_3331_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3331
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3331_1 | HRGMv2_3331_1_20 | 21493 | 22551 | + | 2.A.86.1.5 |
| TC | HRGMv2_3331_1 | HRGMv2_3331_1_21 | 22553 | 23245 | + | 2.A.86.1.5 |
| CAZyme | HRGMv2_3331_1 | HRGMv2_3331_1_22 | 23242 | 24291 | + | GT2 |
| pfam | HRGMv2_3331_1 | HRGMv2_3331_1_23 | 24388 | 25701 | + | tRNA-synt_2b | HGTP_anticodon |
| TC | HRGMv2_3331_1 | HRGMv2_3331_1_24 | 25728 | 26978 | + | 3.A.1.125.1 |
| TC | HRGMv2_3331_1 | HRGMv2_3331_1_25 | 26971 | 27732 | + | 3.A.1.125.1 |
Gene ID: HRGMv2_3331_1_20
Type: TC
Location: 21493 - 22551 (+)
Type: TC
Location: 21493 - 22551 (+)
Gene ID: HRGMv2_3331_1_21
Type: TC
Location: 22553 - 23245 (+)
Type: TC
Location: 22553 - 23245 (+)
Gene ID: HRGMv2_3331_1_22
Type: CAZyme
Location: 23242 - 24291 (+)
Type: CAZyme
Location: 23242 - 24291 (+)
Gene ID: HRGMv2_3331_1_23
Type: pfam
Location: 24388 - 25701 (+)
Type: pfam
Location: 24388 - 25701 (+)
Gene ID: HRGMv2_3331_1_24
Type: TC
Location: 25728 - 26978 (+)
Type: TC
Location: 25728 - 26978 (+)
Gene ID: HRGMv2_3331_1_25
Type: TC
Location: 26971 - 27732 (+)
Type: TC
Location: 26971 - 27732 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp900768185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.