Cluster: HRGMv2_3330_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3330_10 | HRGMv2_3330_10_55 | 55407 | 57443 | - | 5.A.1.5.2 |
| NULL(UNKNOWN) | HRGMv2_3330_10 | HRGMv2_3330_10_56 | 57529 | 58380 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3330_10 | HRGMv2_3330_10_57 | 58718 | 58912 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3330_10 | HRGMv2_3330_10_58 | 58915 | 59418 | - | GH24 |
Gene ID: HRGMv2_3330_10_55
Type: TC
Location: 55407 - 57443 (-)
Type: TC
Location: 55407 - 57443 (-)
Gene ID: HRGMv2_3330_10_56
Type:
Location: 57529 - 58380 (+)
Type:
Location: 57529 - 58380 (+)
Gene ID: HRGMv2_3330_10_57
Type:
Location: 58718 - 58912 (-)
Type:
Location: 58718 - 58912 (-)
Gene ID: HRGMv2_3330_10_58
Type: CAZyme
Location: 58915 - 59418 (-)
Type: CAZyme
Location: 58915 - 59418 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp002440235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.