Cluster: HRGMv2_3330_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3330
- CGC Family ID: CGCFAM_00065
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3330_9 | HRGMv2_3330_9_41 | 37219 | 38079 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3330_9 | HRGMv2_3330_9_42 | 38079 | 38783 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3330_9 | HRGMv2_3330_9_43 | 38783 | 39679 | + | GT92 |
| TC | HRGMv2_3330_9 | HRGMv2_3330_9_44 | 39672 | 41450 | + | 3.A.1.106.1 |
| STP | HRGMv2_3330_9 | HRGMv2_3330_9_45 | 41476 | 42564 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_3330_9 | HRGMv2_3330_9_46 | 42551 | 43444 | + | GT2 |
Gene ID: HRGMv2_3330_9_41
Type: CAZyme
Location: 37219 - 38079 (+)
Type: CAZyme
Location: 37219 - 38079 (+)
Gene ID: HRGMv2_3330_9_42
Type:
Location: 38079 - 38783 (+)
Type:
Location: 38079 - 38783 (+)
Gene ID: HRGMv2_3330_9_43
Type: CAZyme
Location: 38783 - 39679 (+)
Type: CAZyme
Location: 38783 - 39679 (+)
Gene ID: HRGMv2_3330_9_44
Type: TC
Location: 39672 - 41450 (+)
Type: TC
Location: 39672 - 41450 (+)
Gene ID: HRGMv2_3330_9_45
Type: STP
Location: 41476 - 42564 (+)
Type: STP
Location: 41476 - 42564 (+)
Gene ID: HRGMv2_3330_9_46
Type: CAZyme
Location: 42551 - 43444 (+)
Type: CAZyme
Location: 42551 - 43444 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp002440235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.