Cluster: HRGMv2_3330_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3330
- CGC Family ID: CGCFAM_00065
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3330_7 | HRGMv2_3330_7_17 | 16264 | 17196 | - | GT2 |
| TC | HRGMv2_3330_7 | HRGMv2_3330_7_18 | 17335 | 19113 | - | 3.A.1.106.1 |
| CAZyme | HRGMv2_3330_7 | HRGMv2_3330_7_19 | 19106 | 20014 | - | GT92 |
| CAZyme | HRGMv2_3330_7 | HRGMv2_3330_7_20 | 20011 | 21129 | - | GT4 |
Gene ID: HRGMv2_3330_7_17
Type: CAZyme
Location: 16264 - 17196 (-)
Type: CAZyme
Location: 16264 - 17196 (-)
Gene ID: HRGMv2_3330_7_18
Type: TC
Location: 17335 - 19113 (-)
Type: TC
Location: 17335 - 19113 (-)
Gene ID: HRGMv2_3330_7_19
Type: CAZyme
Location: 19106 - 20014 (-)
Type: CAZyme
Location: 19106 - 20014 (-)
Gene ID: HRGMv2_3330_7_20
Type: CAZyme
Location: 20011 - 21129 (-)
Type: CAZyme
Location: 20011 - 21129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp002440235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.