Cluster: HRGMv2_3330_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3330
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3330_1 | HRGMv2_3330_1_172 | 191334 | 192140 | - | 2.A.64.1.3 |
| pfam | HRGMv2_3330_1 | HRGMv2_3330_1_173 | 192130 | 192390 | - | TatA_B_E |
| TC | HRGMv2_3330_1 | HRGMv2_3330_1_174 | 192394 | 193281 | - | 9.B.149.1.11 |
| CAZyme | HRGMv2_3330_1 | HRGMv2_3330_1_175 | 193268 | 194317 | - | GH3 |
Gene ID: HRGMv2_3330_1_172
Type: TC
Location: 191334 - 192140 (-)
Type: TC
Location: 191334 - 192140 (-)
Gene ID: HRGMv2_3330_1_173
Type: pfam
Location: 192130 - 192390 (-)
Type: pfam
Location: 192130 - 192390 (-)
Gene ID: HRGMv2_3330_1_174
Type: TC
Location: 192394 - 193281 (-)
Type: TC
Location: 192394 - 193281 (-)
Gene ID: HRGMv2_3330_1_175
Type: CAZyme
Location: 193268 - 194317 (-)
Type: CAZyme
Location: 193268 - 194317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp002440235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.