Cluster: HRGMv2_3329_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3329
- CGC Family ID: CGCFAM_07176
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3329_19 | HRGMv2_3329_19_25 | 30543 | 31766 | - | GT5 |
| pfam | HRGMv2_3329_19 | HRGMv2_3329_19_26 | 31950 | 33338 | + | DUF4921 |
| NULL(UNKNOWN) | HRGMv2_3329_19 | HRGMv2_3329_19_27 | 33399 | 34127 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3329_19 | HRGMv2_3329_19_28 | 34219 | 35862 | - | 1.A.34.1.3 |
Gene ID: HRGMv2_3329_19_25
Type: CAZyme
Location: 30543 - 31766 (-)
Type: CAZyme
Location: 30543 - 31766 (-)
Gene ID: HRGMv2_3329_19_26
Type: pfam
Location: 31950 - 33338 (+)
Type: pfam
Location: 31950 - 33338 (+)
Gene ID: HRGMv2_3329_19_27
Type:
Location: 33399 - 34127 (-)
Type:
Location: 33399 - 34127 (-)
Gene ID: HRGMv2_3329_19_28
Type: TC
Location: 34219 - 35862 (-)
Type: TC
Location: 34219 - 35862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp902777205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.