Cluster: HRGMv2_3329_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3329
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3329_9 | HRGMv2_3329_9_18 | 21546 | 22814 | - | GT30 |
| pfam | HRGMv2_3329_9 | HRGMv2_3329_9_19 | 22811 | 23539 | - | DUF374 |
| NULL(UNKNOWN) | HRGMv2_3329_9 | HRGMv2_3329_9_20 | 23695 | 24924 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3329_9 | HRGMv2_3329_9_21 | 24985 | 27582 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_3329_9_18
Type: CAZyme
Location: 21546 - 22814 (-)
Type: CAZyme
Location: 21546 - 22814 (-)
Gene ID: HRGMv2_3329_9_19
Type: pfam
Location: 22811 - 23539 (-)
Type: pfam
Location: 22811 - 23539 (-)
Gene ID: HRGMv2_3329_9_20
Type:
Location: 23695 - 24924 (+)
Type:
Location: 23695 - 24924 (+)
Gene ID: HRGMv2_3329_9_21
Type: TC
Location: 24985 - 27582 (-)
Type: TC
Location: 24985 - 27582 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp902777205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.