Cluster: HRGMv2_3329_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3329
- CGC Family ID: CGCFAM_01954
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3329_1 | HRGMv2_3329_1_35 | 40219 | 41250 | + | GH3 |
| TC | HRGMv2_3329_1 | HRGMv2_3329_1_36 | 41251 | 42132 | + | 9.B.149.1.11 |
| pfam | HRGMv2_3329_1 | HRGMv2_3329_1_37 | 42136 | 42396 | + | TatA_B_E |
| TC | HRGMv2_3329_1 | HRGMv2_3329_1_38 | 42386 | 43198 | + | 2.A.64.1.3 |
Gene ID: HRGMv2_3329_1_35
Type: CAZyme
Location: 40219 - 41250 (+)
Type: CAZyme
Location: 40219 - 41250 (+)
Gene ID: HRGMv2_3329_1_36
Type: TC
Location: 41251 - 42132 (+)
Type: TC
Location: 41251 - 42132 (+)
Gene ID: HRGMv2_3329_1_37
Type: pfam
Location: 42136 - 42396 (+)
Type: pfam
Location: 42136 - 42396 (+)
Gene ID: HRGMv2_3329_1_38
Type: TC
Location: 42386 - 43198 (+)
Type: TC
Location: 42386 - 43198 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp902777205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.