Cluster: HRGMv2_3326_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3326_10 | HRGMv2_3326_10_18 | 20930 | 21886 | + | GH3 |
| TC | HRGMv2_3326_10 | HRGMv2_3326_10_19 | 21891 | 22553 | + | 9.B.149.1.11 |
| pfam | HRGMv2_3326_10 | HRGMv2_3326_10_20 | 22565 | 22987 | + | TatA_B_E |
| TC | HRGMv2_3326_10 | HRGMv2_3326_10_21 | 23170 | 23928 | + | 2.A.64.1.1 |
Gene ID: HRGMv2_3326_10_18
Type: CAZyme
Location: 20930 - 21886 (+)
Type: CAZyme
Location: 20930 - 21886 (+)
Gene ID: HRGMv2_3326_10_19
Type: TC
Location: 21891 - 22553 (+)
Type: TC
Location: 21891 - 22553 (+)
Gene ID: HRGMv2_3326_10_20
Type: pfam
Location: 22565 - 22987 (+)
Type: pfam
Location: 22565 - 22987 (+)
Gene ID: HRGMv2_3326_10_21
Type: TC
Location: 23170 - 23928 (+)
Type: TC
Location: 23170 - 23928 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
CALXXA01
Species
CALXXA01 sp944391545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.