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Cluster: HRGMv2_3326_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3326_6 HRGMv2_3326_6_83 85337 86374 + GT4
CAZyme HRGMv2_3326_6 HRGMv2_3326_6_84 86336 87121 - GT2
pfam HRGMv2_3326_6 HRGMv2_3326_6_85 87122 88174 - Glyco_trans_1_2
CAZyme HRGMv2_3326_6 HRGMv2_3326_6_86 88574 89497 - GT10
sulfatase HRGMv2_3326_6 HRGMv2_3326_6_87 89594 90745 + S1_2
pfam HRGMv2_3326_6 HRGMv2_3326_6_88 90737 92866 - N_methyl
CAZyme HRGMv2_3326_6 HRGMv2_3326_6_89 93011 95221 + CBM48 | GH13_9
CAZyme HRGMv2_3326_6 HRGMv2_3326_6_90 95230 97302 + CBM48 | GH13_11
STP HRGMv2_3326_6 HRGMv2_3326_6_91 97299 98297 - HhH-GPD
TC HRGMv2_3326_6 HRGMv2_3326_6_92 98294 100039 - 3.A.9.1.2
Gene ID: HRGMv2_3326_6_83
Type: CAZyme
Location: 85337 - 86374 (+)
Gene ID: HRGMv2_3326_6_84
Type: CAZyme
Location: 86336 - 87121 (-)
Gene ID: HRGMv2_3326_6_85
Type: pfam
Location: 87122 - 88174 (-)
Gene ID: HRGMv2_3326_6_86
Type: CAZyme
Location: 88574 - 89497 (-)
Gene ID: HRGMv2_3326_6_87
Type: sulfatase
Location: 89594 - 90745 (+)
Gene ID: HRGMv2_3326_6_88
Type: pfam
Location: 90737 - 92866 (-)
Gene ID: HRGMv2_3326_6_89
Type: CAZyme
Location: 93011 - 95221 (+)
Gene ID: HRGMv2_3326_6_90
Type: CAZyme
Location: 95230 - 97302 (+)
Gene ID: HRGMv2_3326_6_91
Type: STP
Location: 97299 - 98297 (-)
Gene ID: HRGMv2_3326_6_92
Type: TC
Location: 98294 - 100039 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
UBA3637
→
Genus
CALXXA01
→
Species
CALXXA01 sp944391545

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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