Cluster: HRGMv2_3326_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3326_4 | HRGMv2_3326_4_34 | 30481 | 32616 | - | 3.A.12.1.2 |
| pfam | HRGMv2_3326_4 | HRGMv2_3326_4_35 | 32616 | 33251 | - | LON_substr_bdg |
| CAZyme | HRGMv2_3326_4 | HRGMv2_3326_4_36 | 33314 | 34492 | - | GT4 |
| CAZyme | HRGMv2_3326_4 | HRGMv2_3326_4_37 | 34602 | 37418 | + | GT2 | GT8 |
Gene ID: HRGMv2_3326_4_34
Type: TC
Location: 30481 - 32616 (-)
Type: TC
Location: 30481 - 32616 (-)
Gene ID: HRGMv2_3326_4_35
Type: pfam
Location: 32616 - 33251 (-)
Type: pfam
Location: 32616 - 33251 (-)
Gene ID: HRGMv2_3326_4_36
Type: CAZyme
Location: 33314 - 34492 (-)
Type: CAZyme
Location: 33314 - 34492 (-)
Gene ID: HRGMv2_3326_4_37
Type: CAZyme
Location: 34602 - 37418 (+)
Type: CAZyme
Location: 34602 - 37418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
UBA3637
Genus
CALXXA01
Species
CALXXA01 sp944391545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.