Cluster: HRGMv2_3324_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3324
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3324_2 | HRGMv2_3324_2_112 | 115407 | 117449 | - | GT5 |
| pfam | HRGMv2_3324_2 | HRGMv2_3324_2_113 | 117610 | 118224 | + | GrpE |
| TC | HRGMv2_3324_2 | HRGMv2_3324_2_114 | 118287 | 120593 | - | 3.A.12.1.2 |
Gene ID: HRGMv2_3324_2_112
Type: CAZyme
Location: 115407 - 117449 (-)
Type: CAZyme
Location: 115407 - 117449 (-)
Gene ID: HRGMv2_3324_2_113
Type: pfam
Location: 117610 - 118224 (+)
Type: pfam
Location: 117610 - 118224 (+)
Gene ID: HRGMv2_3324_2_114
Type: TC
Location: 118287 - 120593 (-)
Type: TC
Location: 118287 - 120593 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAJLXD01
Species
CAJLXD01 sp902494875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.