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Cluster: HRGMv2_3324_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3324_1 HRGMv2_3324_1_34 34871 37054 + 3.A.11.3.1
pfam HRGMv2_3324_1 HRGMv2_3324_1_35 37187 37741 + OSCP
TC HRGMv2_3324_1 HRGMv2_3324_1_36 37741 39291 + 3.A.2.1.7
TC HRGMv2_3324_1 HRGMv2_3324_1_37 39301 40221 + 3.A.2.1.7
TC HRGMv2_3324_1 HRGMv2_3324_1_38 40246 41880 + 3.A.2.1.7
pfam HRGMv2_3324_1 HRGMv2_3324_1_39 41944 42321 + ATP-synt_DE_N
CAZyme HRGMv2_3324_1 HRGMv2_3324_1_40 42435 43574 + GT4
CAZyme HRGMv2_3324_1 HRGMv2_3324_1_41 43561 44439 - GT32
CAZyme HRGMv2_3324_1 HRGMv2_3324_1_42 44448 45542 - GT2
Gene ID: HRGMv2_3324_1_34
Type: TC
Location: 34871 - 37054 (+)
Gene ID: HRGMv2_3324_1_35
Type: pfam
Location: 37187 - 37741 (+)
Gene ID: HRGMv2_3324_1_36
Type: TC
Location: 37741 - 39291 (+)
Gene ID: HRGMv2_3324_1_37
Type: TC
Location: 39301 - 40221 (+)
Gene ID: HRGMv2_3324_1_38
Type: TC
Location: 40246 - 41880 (+)
Gene ID: HRGMv2_3324_1_39
Type: pfam
Location: 41944 - 42321 (+)
Gene ID: HRGMv2_3324_1_40
Type: CAZyme
Location: 42435 - 43574 (+)
Gene ID: HRGMv2_3324_1_41
Type: CAZyme
Location: 43561 - 44439 (-)
Gene ID: HRGMv2_3324_1_42
Type: CAZyme
Location: 44448 - 45542 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
CAG-239
→
Genus
CAJLXD01
→
Species
CAJLXD01 sp902494875

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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