Cluster: HRGMv2_3324_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3324
- CGC Family ID: CGCFAM_00733
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3324_17 | HRGMv2_3324_17_9 | 7770 | 9188 | + | 1.A.34.1.3 |
| NULL(UNKNOWN) | HRGMv2_3324_17 | HRGMv2_3324_17_10 | 9293 | 9589 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3324_17 | HRGMv2_3324_17_11 | 9768 | 11306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3324_17 | HRGMv2_3324_17_12 | 11365 | 13167 | - | GH23 |
Gene ID: HRGMv2_3324_17_9
Type: TC
Location: 7770 - 9188 (+)
Type: TC
Location: 7770 - 9188 (+)
Gene ID: HRGMv2_3324_17_10
Type:
Location: 9293 - 9589 (+)
Type:
Location: 9293 - 9589 (+)
Gene ID: HRGMv2_3324_17_11
Type:
Location: 9768 - 11306 (+)
Type:
Location: 9768 - 11306 (+)
Gene ID: HRGMv2_3324_17_12
Type: CAZyme
Location: 11365 - 13167 (-)
Type: CAZyme
Location: 11365 - 13167 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAJLXD01
Species
CAJLXD01 sp902494875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.