Cluster: HRGMv2_3324_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3324
- CGC Family ID: CGCFAM_00084
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3324_14 | HRGMv2_3324_14_14 | 15440 | 16510 | + | 2.A.86.1.5 |
| TC | HRGMv2_3324_14 | HRGMv2_3324_14_15 | 16656 | 17726 | + | 9.B.146.1.6 |
| TC | HRGMv2_3324_14 | HRGMv2_3324_14_16 | 17739 | 18878 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3324_14 | HRGMv2_3324_14_17 | 18859 | 19977 | + | GT28 |
Gene ID: HRGMv2_3324_14_14
Type: TC
Location: 15440 - 16510 (+)
Type: TC
Location: 15440 - 16510 (+)
Gene ID: HRGMv2_3324_14_15
Type: TC
Location: 16656 - 17726 (+)
Type: TC
Location: 16656 - 17726 (+)
Gene ID: HRGMv2_3324_14_16
Type: TC
Location: 17739 - 18878 (+)
Type: TC
Location: 17739 - 18878 (+)
Gene ID: HRGMv2_3324_14_17
Type: CAZyme
Location: 18859 - 19977 (+)
Type: CAZyme
Location: 18859 - 19977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAJLXD01
Species
CAJLXD01 sp902494875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.