Cluster: HRGMv2_3324_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3324
- CGC Family ID: CGCFAM_03730
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3324_6 | HRGMv2_3324_6_19 | 23014 | 24165 | - | GT4 |
| peptidase | HRGMv2_3324_6 | HRGMv2_3324_6_20 | 24214 | 24966 | + | S09.UPW |
| TC | HRGMv2_3324_6 | HRGMv2_3324_6_21 | 25041 | 26201 | + | 8.A.1.7.1 |
| TC | HRGMv2_3324_6 | HRGMv2_3324_6_22 | 26201 | 29413 | + | 2.A.6.2.22 |
| TC | HRGMv2_3324_6 | HRGMv2_3324_6_23 | 29403 | 30860 | + | 2.A.6.2.14 |
Gene ID: HRGMv2_3324_6_19
Type: CAZyme
Location: 23014 - 24165 (-)
Type: CAZyme
Location: 23014 - 24165 (-)
Gene ID: HRGMv2_3324_6_20
Type: peptidase
Location: 24214 - 24966 (+)
Type: peptidase
Location: 24214 - 24966 (+)
Gene ID: HRGMv2_3324_6_21
Type: TC
Location: 25041 - 26201 (+)
Type: TC
Location: 25041 - 26201 (+)
Gene ID: HRGMv2_3324_6_22
Type: TC
Location: 26201 - 29413 (+)
Type: TC
Location: 26201 - 29413 (+)
Gene ID: HRGMv2_3324_6_23
Type: TC
Location: 29403 - 30860 (+)
Type: TC
Location: 29403 - 30860 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAJLXD01
Species
CAJLXD01 sp902494875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.