Cluster: HRGMv2_3318_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3318
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3318_31 | HRGMv2_3318_31_11 | 10290 | 11408 | - | GT28 |
| TC | HRGMv2_3318_31 | HRGMv2_3318_31_12 | 11395 | 12528 | - | 2.A.103.1.1 |
| TC | HRGMv2_3318_31 | HRGMv2_3318_31_13 | 12533 | 13603 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3318_31_11
Type: CAZyme
Location: 10290 - 11408 (-)
Type: CAZyme
Location: 10290 - 11408 (-)
Gene ID: HRGMv2_3318_31_12
Type: TC
Location: 11395 - 12528 (-)
Type: TC
Location: 11395 - 12528 (-)
Gene ID: HRGMv2_3318_31_13
Type: TC
Location: 12533 - 13603 (-)
Type: TC
Location: 12533 - 13603 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp030536665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.