Cluster: HRGMv2_3318_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3318
- CGC Family ID: CGCFAM_10358
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3318_41 | HRGMv2_3318_41_9 | 5732 | 6655 | + | GT2 |
| pfam | HRGMv2_3318_41 | HRGMv2_3318_41_10 | 6829 | 7632 | - | Ion_trans_2 |
| TC | HRGMv2_3318_41 | HRGMv2_3318_41_11 | 7638 | 8819 | - | 2.A.36.6.4 |
Gene ID: HRGMv2_3318_41_9
Type: CAZyme
Location: 5732 - 6655 (+)
Type: CAZyme
Location: 5732 - 6655 (+)
Gene ID: HRGMv2_3318_41_10
Type: pfam
Location: 6829 - 7632 (-)
Type: pfam
Location: 6829 - 7632 (-)
Gene ID: HRGMv2_3318_41_11
Type: TC
Location: 7638 - 8819 (-)
Type: TC
Location: 7638 - 8819 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
HGM16780
Species
HGM16780 sp030536665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.