Cluster: HRGMv2_3315_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3315
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3315_27 | HRGMv2_3315_27_16 | 15468 | 17363 | + | 3.A.1.121.4 |
| pfam | HRGMv2_3315_27 | HRGMv2_3315_27_17 | 17368 | 18987 | - | Sulfatase |
| NULL(UNKNOWN) | HRGMv2_3315_27 | HRGMv2_3315_27_18 | 19023 | 19442 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3315_27 | HRGMv2_3315_27_19 | 19436 | 20251 | - | GT32 |
| CAZyme | HRGMv2_3315_27 | HRGMv2_3315_27_20 | 20248 | 21375 | - | GT4 |
Gene ID: HRGMv2_3315_27_16
Type: TC
Location: 15468 - 17363 (+)
Type: TC
Location: 15468 - 17363 (+)
Gene ID: HRGMv2_3315_27_17
Type: pfam
Location: 17368 - 18987 (-)
Type: pfam
Location: 17368 - 18987 (-)
Gene ID: HRGMv2_3315_27_18
Type:
Location: 19023 - 19442 (-)
Type:
Location: 19023 - 19442 (-)
Gene ID: HRGMv2_3315_27_19
Type: CAZyme
Location: 19436 - 20251 (-)
Type: CAZyme
Location: 19436 - 20251 (-)
Gene ID: HRGMv2_3315_27_20
Type: CAZyme
Location: 20248 - 21375 (-)
Type: CAZyme
Location: 20248 - 21375 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.