Cluster: HRGMv2_3314_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3314
- CGC Family ID: CGCFAM_06217
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3314_19 | HRGMv2_3314_19_1 | 288 | 2966 | - | 4.A.2.1.17 |
| pfam | HRGMv2_3314_19 | HRGMv2_3314_19_2 | 2984 | 5137 | - | tRNA_synt_2f | DALR_1 |
| pfam | HRGMv2_3314_19 | HRGMv2_3314_19_3 | 5141 | 6022 | - | tRNA-synt_2e |
| CAZyme | HRGMv2_3314_19 | HRGMv2_3314_19_4 | 6193 | 7089 | + | GT2 |
Gene ID: HRGMv2_3314_19_1
Type: TC
Location: 288 - 2966 (-)
Type: TC
Location: 288 - 2966 (-)
Gene ID: HRGMv2_3314_19_2
Type: pfam
Location: 2984 - 5137 (-)
Type: pfam
Location: 2984 - 5137 (-)
Gene ID: HRGMv2_3314_19_3
Type: pfam
Location: 5141 - 6022 (-)
Type: pfam
Location: 5141 - 6022 (-)
Gene ID: HRGMv2_3314_19_4
Type: CAZyme
Location: 6193 - 7089 (+)
Type: CAZyme
Location: 6193 - 7089 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp900550445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.