Cluster: HRGMv2_3314_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3314
- CGC Family ID: CGCFAM_03871
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3314_10 | HRGMv2_3314_10_18 | 15662 | 18439 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_3314_10 | HRGMv2_3314_10_19 | 18462 | 19712 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3314_10 | HRGMv2_3314_10_20 | 19918 | 20589 | + | DUF374 |
| CAZyme | HRGMv2_3314_10 | HRGMv2_3314_10_21 | 20586 | 21863 | + | GT30 |
Gene ID: HRGMv2_3314_10_18
Type: TC
Location: 15662 - 18439 (+)
Type: TC
Location: 15662 - 18439 (+)
Gene ID: HRGMv2_3314_10_19
Type:
Location: 18462 - 19712 (-)
Type:
Location: 18462 - 19712 (-)
Gene ID: HRGMv2_3314_10_20
Type: pfam
Location: 19918 - 20589 (+)
Type: pfam
Location: 19918 - 20589 (+)
Gene ID: HRGMv2_3314_10_21
Type: CAZyme
Location: 20586 - 21863 (+)
Type: CAZyme
Location: 20586 - 21863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp900550445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.