Cluster: HRGMv2_3314_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3314
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3314_1 | HRGMv2_3314_1_117 | 125588 | 126715 | + | GT4 |
| CAZyme | HRGMv2_3314_1 | HRGMv2_3314_1_118 | 126712 | 127527 | + | GT32 |
| NULL(UNKNOWN) | HRGMv2_3314_1 | HRGMv2_3314_1_119 | 127521 | 127940 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3314_1 | HRGMv2_3314_1_120 | 127974 | 129593 | + | Sulfatase |
| TC | HRGMv2_3314_1 | HRGMv2_3314_1_121 | 129601 | 131496 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_3314_1_117
Type: CAZyme
Location: 125588 - 126715 (+)
Type: CAZyme
Location: 125588 - 126715 (+)
Gene ID: HRGMv2_3314_1_118
Type: CAZyme
Location: 126712 - 127527 (+)
Type: CAZyme
Location: 126712 - 127527 (+)
Gene ID: HRGMv2_3314_1_119
Type:
Location: 127521 - 127940 (+)
Type:
Location: 127521 - 127940 (+)
Gene ID: HRGMv2_3314_1_120
Type: pfam
Location: 127974 - 129593 (+)
Type: pfam
Location: 127974 - 129593 (+)
Gene ID: HRGMv2_3314_1_121
Type: TC
Location: 129601 - 131496 (-)
Type: TC
Location: 129601 - 131496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-977
Genus
UBA11549
Species
UBA11549 sp900550445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.