Cluster: HRGMv2_3313_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3313
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3313_15 | HRGMv2_3313_15_24 | 17574 | 18383 | + | GT2 |
| pfam | HRGMv2_3313_15 | HRGMv2_3313_15_25 | 18641 | 19348 | - | Pirin | Pirin_C_2 |
| NULL(UNKNOWN) | HRGMv2_3313_15 | HRGMv2_3313_15_26 | 19483 | 20172 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3313_15 | HRGMv2_3313_15_27 | 20243 | 23065 | - | 2.A.1.42.2 |
Gene ID: HRGMv2_3313_15_24
Type: CAZyme
Location: 17574 - 18383 (+)
Type: CAZyme
Location: 17574 - 18383 (+)
Gene ID: HRGMv2_3313_15_25
Type: pfam
Location: 18641 - 19348 (-)
Type: pfam
Location: 18641 - 19348 (-)
Gene ID: HRGMv2_3313_15_26
Type:
Location: 19483 - 20172 (-)
Type:
Location: 19483 - 20172 (-)
Gene ID: HRGMv2_3313_15_27
Type: TC
Location: 20243 - 23065 (-)
Type: TC
Location: 20243 - 23065 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.