Cluster: HRGMv2_3313_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3313
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3313_7 | HRGMv2_3313_7_39 | 37901 | 39775 | + | GT51 |
| pfam | HRGMv2_3313_7 | HRGMv2_3313_7_40 | 39878 | 41413 | + | Phosphodiest | Metalloenzyme | iPGM_N |
| STP | HRGMv2_3313_7 | HRGMv2_3313_7_41 | 41438 | 42721 | + | Peptidase_M23 |
| TC | HRGMv2_3313_7 | HRGMv2_3313_7_42 | 42752 | 44065 | + | 9.B.174.1.1 |
Gene ID: HRGMv2_3313_7_39
Type: CAZyme
Location: 37901 - 39775 (+)
Type: CAZyme
Location: 37901 - 39775 (+)
Gene ID: HRGMv2_3313_7_40
Type: pfam
Location: 39878 - 41413 (+)
Type: pfam
Location: 39878 - 41413 (+)
Gene ID: HRGMv2_3313_7_41
Type: STP
Location: 41438 - 42721 (+)
Type: STP
Location: 41438 - 42721 (+)
Gene ID: HRGMv2_3313_7_42
Type: TC
Location: 42752 - 44065 (+)
Type: TC
Location: 42752 - 44065 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.