Cluster: HRGMv2_3313_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3313
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3313_6 | HRGMv2_3313_6_52 | 50981 | 52378 | - | 3.A.1.105.4 |
| TC | HRGMv2_3313_6 | HRGMv2_3313_6_53 | 52375 | 55530 | - | 2.A.6.2.16 |
| TC | HRGMv2_3313_6 | HRGMv2_3313_6_54 | 55530 | 56678 | - | 2.A.6.2.39 |
| TC | HRGMv2_3313_6 | HRGMv2_3313_6_55 | 56845 | 57894 | + | 9.B.146.1.6 |
| TC | HRGMv2_3313_6 | HRGMv2_3313_6_56 | 57907 | 59037 | + | 2.A.103.1.1 |
| CAZyme | HRGMv2_3313_6 | HRGMv2_3313_6_57 | 59027 | 60169 | + | GT28 |
Gene ID: HRGMv2_3313_6_52
Type: TC
Location: 50981 - 52378 (-)
Type: TC
Location: 50981 - 52378 (-)
Gene ID: HRGMv2_3313_6_53
Type: TC
Location: 52375 - 55530 (-)
Type: TC
Location: 52375 - 55530 (-)
Gene ID: HRGMv2_3313_6_54
Type: TC
Location: 55530 - 56678 (-)
Type: TC
Location: 55530 - 56678 (-)
Gene ID: HRGMv2_3313_6_55
Type: TC
Location: 56845 - 57894 (+)
Type: TC
Location: 56845 - 57894 (+)
Gene ID: HRGMv2_3313_6_56
Type: TC
Location: 57907 - 59037 (+)
Type: TC
Location: 57907 - 59037 (+)
Gene ID: HRGMv2_3313_6_57
Type: CAZyme
Location: 59027 - 60169 (+)
Type: CAZyme
Location: 59027 - 60169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.