Cluster: HRGMv2_3313_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3313
- CGC Family ID: CGCFAM_06216
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3313_6 | HRGMv2_3313_6_23 | 22266 | 23180 | - | 3.A.5.1.1 |
| pfam | HRGMv2_3313_6 | HRGMv2_3313_6_24 | 23173 | 24216 | - | UPF0004 | Radical_SAM |
| pfam | HRGMv2_3313_6 | HRGMv2_3313_6_25 | 24598 | 25392 | - | Glucosamine_iso |
| CAZyme | HRGMv2_3313_6 | HRGMv2_3313_6_26 | 25376 | 26551 | - | CE9 |
Gene ID: HRGMv2_3313_6_23
Type: TC
Location: 22266 - 23180 (-)
Type: TC
Location: 22266 - 23180 (-)
Gene ID: HRGMv2_3313_6_24
Type: pfam
Location: 23173 - 24216 (-)
Type: pfam
Location: 23173 - 24216 (-)
Gene ID: HRGMv2_3313_6_25
Type: pfam
Location: 24598 - 25392 (-)
Type: pfam
Location: 24598 - 25392 (-)
Gene ID: HRGMv2_3313_6_26
Type: CAZyme
Location: 25376 - 26551 (-)
Type: CAZyme
Location: 25376 - 26551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.