Cluster: HRGMv2_3313_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3313
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3313_1 | HRGMv2_3313_1_86 | 74907 | 76952 | + | GT5 |
| TC | HRGMv2_3313_1 | HRGMv2_3313_1_87 | 77059 | 77553 | + | 3.D.1.6.1 |
| TC | HRGMv2_3313_1 | HRGMv2_3313_1_88 | 77546 | 79243 | + | 3.D.1.5.1 |
Gene ID: HRGMv2_3313_1_86
Type: CAZyme
Location: 74907 - 76952 (+)
Type: CAZyme
Location: 74907 - 76952 (+)
Gene ID: HRGMv2_3313_1_87
Type: TC
Location: 77059 - 77553 (+)
Type: TC
Location: 77059 - 77553 (+)
Gene ID: HRGMv2_3313_1_88
Type: TC
Location: 77546 - 79243 (+)
Type: TC
Location: 77546 - 79243 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.