Cluster: HRGMv2_3313_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3313
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3313_41 | HRGMv2_3313_41_4 | 2770 | 3531 | - | 3.A.1.27.3 |
| pfam | HRGMv2_3313_41 | HRGMv2_3313_41_5 | 3754 | 4914 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| CAZyme | HRGMv2_3313_41 | HRGMv2_3313_41_6 | 5077 | 6141 | + | GT2 |
Gene ID: HRGMv2_3313_41_4
Type: TC
Location: 2770 - 3531 (-)
Type: TC
Location: 2770 - 3531 (-)
Gene ID: HRGMv2_3313_41_5
Type: pfam
Location: 3754 - 4914 (+)
Type: pfam
Location: 3754 - 4914 (+)
Gene ID: HRGMv2_3313_41_6
Type: CAZyme
Location: 5077 - 6141 (+)
Type: CAZyme
Location: 5077 - 6141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.