Cluster: HRGMv2_3313_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3313
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3313_19 | HRGMv2_3313_19_10 | 10324 | 12318 | + | GT111 | GT8 |
| CAZyme | HRGMv2_3313_19 | HRGMv2_3313_19_11 | 12312 | 13388 | + | GT8 |
| CAZyme | HRGMv2_3313_19 | HRGMv2_3313_19_12 | 13461 | 14528 | + | GT2 |
| TC | HRGMv2_3313_19 | HRGMv2_3313_19_13 | 15011 | 15277 | + | 2.A.123.2.2 |
| NULL(UNKNOWN) | HRGMv2_3313_19 | HRGMv2_3313_19_14 | 15292 | 15627 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3313_19 | HRGMv2_3313_19_15 | 15611 | 16792 | - | 2.A.1.7.17 |
Gene ID: HRGMv2_3313_19_10
Type: CAZyme
Location: 10324 - 12318 (+)
Type: CAZyme
Location: 10324 - 12318 (+)
Gene ID: HRGMv2_3313_19_11
Type: CAZyme
Location: 12312 - 13388 (+)
Type: CAZyme
Location: 12312 - 13388 (+)
Gene ID: HRGMv2_3313_19_12
Type: CAZyme
Location: 13461 - 14528 (+)
Type: CAZyme
Location: 13461 - 14528 (+)
Gene ID: HRGMv2_3313_19_13
Type: TC
Location: 15011 - 15277 (+)
Type: TC
Location: 15011 - 15277 (+)
Gene ID: HRGMv2_3313_19_14
Type:
Location: 15292 - 15627 (-)
Type:
Location: 15292 - 15627 (-)
Gene ID: HRGMv2_3313_19_15
Type: TC
Location: 15611 - 16792 (-)
Type: TC
Location: 15611 - 16792 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.