Cluster: HRGMv2_3313_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3313
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3313_1 | HRGMv2_3313_1_72 | 63070 | 63870 | + | GH24 |
| peptidase | HRGMv2_3313_1 | HRGMv2_3313_1_73 | 63867 | 64979 | - | M20.UPW |
| pfam | HRGMv2_3313_1 | HRGMv2_3313_1_74 | 65079 | 65582 | + | SH3_4 |
| TC | HRGMv2_3313_1 | HRGMv2_3313_1_75 | 65600 | 66574 | + | 3.A.14.1.1 |
Gene ID: HRGMv2_3313_1_72
Type: CAZyme
Location: 63070 - 63870 (+)
Type: CAZyme
Location: 63070 - 63870 (+)
Gene ID: HRGMv2_3313_1_73
Type: peptidase
Location: 63867 - 64979 (-)
Type: peptidase
Location: 63867 - 64979 (-)
Gene ID: HRGMv2_3313_1_74
Type: pfam
Location: 65079 - 65582 (+)
Type: pfam
Location: 65079 - 65582 (+)
Gene ID: HRGMv2_3313_1_75
Type: TC
Location: 65600 - 66574 (+)
Type: TC
Location: 65600 - 66574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp902489795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.