Cluster: HRGMv2_3301_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3301
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3301_1 | HRGMv2_3301_1_37 | 51475 | 52974 | - | 3.A.1.10.4 |
| TC | HRGMv2_3301_1 | HRGMv2_3301_1_38 | 53152 | 54834 | - | 3.A.1.10.4 |
| TC | HRGMv2_3301_1 | HRGMv2_3301_1_39 | 54932 | 56071 | - | 3.A.1.10.4 |
| pfam | HRGMv2_3301_1 | HRGMv2_3301_1_40 | 56297 | 57052 | - | Methyltrans_RNA |
| CAZyme | HRGMv2_3301_1 | HRGMv2_3301_1_41 | 57073 | 58653 | - | GT30 |
Gene ID: HRGMv2_3301_1_37
Type: TC
Location: 51475 - 52974 (-)
Type: TC
Location: 51475 - 52974 (-)
Gene ID: HRGMv2_3301_1_38
Type: TC
Location: 53152 - 54834 (-)
Type: TC
Location: 53152 - 54834 (-)
Gene ID: HRGMv2_3301_1_39
Type: TC
Location: 54932 - 56071 (-)
Type: TC
Location: 54932 - 56071 (-)
Gene ID: HRGMv2_3301_1_40
Type: pfam
Location: 56297 - 57052 (-)
Type: pfam
Location: 56297 - 57052 (-)
Gene ID: HRGMv2_3301_1_41
Type: CAZyme
Location: 57073 - 58653 (-)
Type: CAZyme
Location: 57073 - 58653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Psychrobacter
Species
Psychrobacter faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.