Cluster: HRGMv2_3300_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3300_6 | HRGMv2_3300_6_34 | 36457 | 37392 | + | 3.A.1.105.17 |
| TC | HRGMv2_3300_6 | HRGMv2_3300_6_35 | 37389 | 38162 | + | 3.A.1.105.17 |
| pfam | HRGMv2_3300_6 | HRGMv2_3300_6_36 | 38162 | 38977 | + | QueF | QueF_N |
| NULL(UNKNOWN) | HRGMv2_3300_6 | HRGMv2_3300_6_37 | 39003 | 39653 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3300_6 | HRGMv2_3300_6_38 | 40129 | 41130 | + | GH103 |
Gene ID: HRGMv2_3300_6_34
Type: TC
Location: 36457 - 37392 (+)
Type: TC
Location: 36457 - 37392 (+)
Gene ID: HRGMv2_3300_6_35
Type: TC
Location: 37389 - 38162 (+)
Type: TC
Location: 37389 - 38162 (+)
Gene ID: HRGMv2_3300_6_36
Type: pfam
Location: 38162 - 38977 (+)
Type: pfam
Location: 38162 - 38977 (+)
Gene ID: HRGMv2_3300_6_37
Type:
Location: 39003 - 39653 (+)
Type:
Location: 39003 - 39653 (+)
Gene ID: HRGMv2_3300_6_38
Type: CAZyme
Location: 40129 - 41130 (+)
Type: CAZyme
Location: 40129 - 41130 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter albensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.