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Cluster: HRGMv2_3300_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3300_71 HRGMv2_3300_71_2 250 1530 - GH103
pfam HRGMv2_3300_71 HRGMv2_3300_71_3 2178 3299 - ATP-grasp | CPSase_L_D2 | PurK_C | RS_preATP-grasp-like
pfam HRGMv2_3300_71 HRGMv2_3300_71_4 3315 3827 - AIRC
TC HRGMv2_3300_71 HRGMv2_3300_71_5 4267 4608 - 2.A.7.34.1
pfam HRGMv2_3300_71 HRGMv2_3300_71_6 4862 6226 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
pfam HRGMv2_3300_71 HRGMv2_3300_71_7 6469 6753 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_CG
TC HRGMv2_3300_71 HRGMv2_3300_71_8 6998 8188 + 2.A.1.2.15
TC HRGMv2_3300_71 HRGMv2_3300_71_9 8515 9471 + 2.A.109.1.7
Gene ID: HRGMv2_3300_71_2
Type: CAZyme
Location: 250 - 1530 (-)
Gene ID: HRGMv2_3300_71_3
Type: pfam
Location: 2178 - 3299 (-)
Gene ID: HRGMv2_3300_71_4
Type: pfam
Location: 3315 - 3827 (-)
Gene ID: HRGMv2_3300_71_5
Type: TC
Location: 4267 - 4608 (-)
Gene ID: HRGMv2_3300_71_6
Type: pfam
Location: 4862 - 6226 (+)
Gene ID: HRGMv2_3300_71_7
Type: pfam
Location: 6469 - 6753 (-)
Gene ID: HRGMv2_3300_71_8
Type: TC
Location: 6998 - 8188 (+)
Gene ID: HRGMv2_3300_71_9
Type: TC
Location: 8515 - 9471 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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