Cluster: HRGMv2_3295_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3295
- CGC Family ID: CGCFAM_02796
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3295_4 | HRGMv2_3295_4_80 | 67486 | 69354 | + | AA1 |
| NULL(UNKNOWN) | HRGMv2_3295_4 | HRGMv2_3295_4_81 | 69341 | 69559 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3295_4 | HRGMv2_3295_4_82 | 69621 | 70541 | + | 1.B.76.1.2 |
| TC | HRGMv2_3295_4 | HRGMv2_3295_4_83 | 70775 | 71092 | + | 2.A.7.1.4 |
| TC | HRGMv2_3295_4 | HRGMv2_3295_4_84 | 71175 | 71492 | + | 2.A.7.1.4 |
Gene ID: HRGMv2_3295_4_80
Type: CAZyme
Location: 67486 - 69354 (+)
Type: CAZyme
Location: 67486 - 69354 (+)
Gene ID: HRGMv2_3295_4_81
Type:
Location: 69341 - 69559 (+)
Type:
Location: 69341 - 69559 (+)
Gene ID: HRGMv2_3295_4_82
Type: TC
Location: 69621 - 70541 (+)
Type: TC
Location: 69621 - 70541 (+)
Gene ID: HRGMv2_3295_4_83
Type: TC
Location: 70775 - 71092 (+)
Type: TC
Location: 70775 - 71092 (+)
Gene ID: HRGMv2_3295_4_84
Type: TC
Location: 71175 - 71492 (+)
Type: TC
Location: 71175 - 71492 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.