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Cluster: HRGMv2_3295_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3295_2 HRGMv2_3295_2_58 66805 68670 - 9.B.18.2.1
STP HRGMv2_3295_2 HRGMv2_3295_2_59 68728 69903 - Aminotran_1_2
NULL(UNKNOWN) HRGMv2_3295_2 HRGMv2_3295_2_60 69922 70578 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3295_2 HRGMv2_3295_2_61 70571 71170 - 9.B.18.1.2
pfam HRGMv2_3295_2 HRGMv2_3295_2_62 71325 71864 - Hexapep | Hexapep_2
CAZyme HRGMv2_3295_2 HRGMv2_3295_2_63 71897 73036 - GT4
CAZyme HRGMv2_3295_2 HRGMv2_3295_2_64 73033 74127 - GT4
CAZyme HRGMv2_3295_2 HRGMv2_3295_2_65 74124 75242 - GT4
Gene ID: HRGMv2_3295_2_58
Type: TC
Location: 66805 - 68670 (-)
Gene ID: HRGMv2_3295_2_59
Type: STP
Location: 68728 - 69903 (-)
Gene ID: HRGMv2_3295_2_60
Type:
Location: 69922 - 70578 (-)
Gene ID: HRGMv2_3295_2_61
Type: TC
Location: 70571 - 71170 (-)
Gene ID: HRGMv2_3295_2_62
Type: pfam
Location: 71325 - 71864 (-)
Gene ID: HRGMv2_3295_2_63
Type: CAZyme
Location: 71897 - 73036 (-)
Gene ID: HRGMv2_3295_2_64
Type: CAZyme
Location: 73033 - 74127 (-)
Gene ID: HRGMv2_3295_2_65
Type: CAZyme
Location: 74124 - 75242 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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