dbCAN Logo

Cluster: HRGMv2_3295_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3295_29 HRGMv2_3295_29_12 12357 15461 + 2.A.6.2.4
TC HRGMv2_3295_29 HRGMv2_3295_29_13 15597 16943 + 1.A.26.1.2
pfam HRGMv2_3295_29 HRGMv2_3295_29_14 16990 17652 + DUF4112
NULL(UNKNOWN) HRGMv2_3295_29 HRGMv2_3295_29_15 17659 18024 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3295_29 HRGMv2_3295_29_16 18095 19000 - 9.B.1.1.6
CAZyme HRGMv2_3295_29 HRGMv2_3295_29_17 19118 19990 - GH23
pfam HRGMv2_3295_29 HRGMv2_3295_29_18 20492 21415 + ATP_bind_3
pfam HRGMv2_3295_29 HRGMv2_3295_29_19 21643 22026 + SCP2
CAZyme HRGMv2_3295_29 HRGMv2_3295_29_20 22094 23206 - GH23
Gene ID: HRGMv2_3295_29_12
Type: TC
Location: 12357 - 15461 (+)
Gene ID: HRGMv2_3295_29_13
Type: TC
Location: 15597 - 16943 (+)
Gene ID: HRGMv2_3295_29_14
Type: pfam
Location: 16990 - 17652 (+)
Gene ID: HRGMv2_3295_29_15
Type:
Location: 17659 - 18024 (+)
Gene ID: HRGMv2_3295_29_16
Type: TC
Location: 18095 - 19000 (-)
Gene ID: HRGMv2_3295_29_17
Type: CAZyme
Location: 19118 - 19990 (-)
Gene ID: HRGMv2_3295_29_18
Type: pfam
Location: 20492 - 21415 (+)
Gene ID: HRGMv2_3295_29_19
Type: pfam
Location: 21643 - 22026 (+)
Gene ID: HRGMv2_3295_29_20
Type: CAZyme
Location: 22094 - 23206 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List