Cluster: HRGMv2_3289_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3289
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3289_2 | HRGMv2_3289_2_317 | 356410 | 357345 | + | 3.A.1.105.17 |
| TC | HRGMv2_3289_2 | HRGMv2_3289_2_318 | 357342 | 358115 | + | 3.A.1.105.17 |
| pfam | HRGMv2_3289_2 | HRGMv2_3289_2_319 | 358112 | 358924 | + | QueF | QueF_N |
| NULL(UNKNOWN) | HRGMv2_3289_2 | HRGMv2_3289_2_320 | 358948 | 359598 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3289_2 | HRGMv2_3289_2_321 | 359727 | 360869 | + | 2.A.103.1.2 |
| CAZyme | HRGMv2_3289_2 | HRGMv2_3289_2_322 | 360889 | 361890 | + | GH103 |
Gene ID: HRGMv2_3289_2_317
Type: TC
Location: 356410 - 357345 (+)
Type: TC
Location: 356410 - 357345 (+)
Gene ID: HRGMv2_3289_2_318
Type: TC
Location: 357342 - 358115 (+)
Type: TC
Location: 357342 - 358115 (+)
Gene ID: HRGMv2_3289_2_319
Type: pfam
Location: 358112 - 358924 (+)
Type: pfam
Location: 358112 - 358924 (+)
Gene ID: HRGMv2_3289_2_320
Type:
Location: 358948 - 359598 (+)
Type:
Location: 358948 - 359598 (+)
Gene ID: HRGMv2_3289_2_321
Type: TC
Location: 359727 - 360869 (+)
Type: TC
Location: 359727 - 360869 (+)
Gene ID: HRGMv2_3289_2_322
Type: CAZyme
Location: 360889 - 361890 (+)
Type: CAZyme
Location: 360889 - 361890 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter baumannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.