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Cluster: HRGMv2_3289_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3289_2 HRGMv2_3289_2_148 167751 168998 - GT2
CAZyme HRGMv2_3289_2 HRGMv2_3289_2_149 168998 170827 - CE4
pfam HRGMv2_3289_2 HRGMv2_3289_2_150 170827 173265 - PgaA_barrel
pfam HRGMv2_3289_2 HRGMv2_3289_2_151 173651 174487 - Kinase-PPPase
TC HRGMv2_3289_2 HRGMv2_3289_2_152 174643 177021 + 8.A.7.1.4
pfam HRGMv2_3289_2 HRGMv2_3289_2_153 177086 177841 + RDD | GYF_2
TC HRGMv2_3289_2 HRGMv2_3289_2_154 178158 179210 + 3.D.4.5.1
TC HRGMv2_3289_2 HRGMv2_3289_2_155 179214 181205 + 3.D.4.5.1
TC HRGMv2_3289_2 HRGMv2_3289_2_156 181210 181830 + 3.D.4.5.1
TC HRGMv2_3289_2 HRGMv2_3289_2_157 181830 182159 + 3.D.4.5.1
Gene ID: HRGMv2_3289_2_148
Type: CAZyme
Location: 167751 - 168998 (-)
Gene ID: HRGMv2_3289_2_149
Type: CAZyme
Location: 168998 - 170827 (-)
Gene ID: HRGMv2_3289_2_150
Type: pfam
Location: 170827 - 173265 (-)
Gene ID: HRGMv2_3289_2_151
Type: pfam
Location: 173651 - 174487 (-)
Gene ID: HRGMv2_3289_2_152
Type: TC
Location: 174643 - 177021 (+)
Gene ID: HRGMv2_3289_2_153
Type: pfam
Location: 177086 - 177841 (+)
Gene ID: HRGMv2_3289_2_154
Type: TC
Location: 178158 - 179210 (+)
Gene ID: HRGMv2_3289_2_155
Type: TC
Location: 179214 - 181205 (+)
Gene ID: HRGMv2_3289_2_156
Type: TC
Location: 181210 - 181830 (+)
Gene ID: HRGMv2_3289_2_157
Type: TC
Location: 181830 - 182159 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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