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Cluster: HRGMv2_3289_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3289_1 HRGMv2_3289_1_828 876310 878409 - 1.B.14.1.1
CAZyme HRGMv2_3289_1 HRGMv2_3289_1_829 878631 879806 + GT19
STP HRGMv2_3289_1 HRGMv2_3289_1_830 879803 880450 - TetR_N
TC HRGMv2_3289_1 HRGMv2_3289_1_831 880569 881591 + 3.A.1.105.4
TC HRGMv2_3289_1 HRGMv2_3289_1_832 881584 883341 + 3.A.1.105.4
TC HRGMv2_3289_1 HRGMv2_3289_1_833 883352 884476 + 3.A.1.105.4
TC HRGMv2_3289_1 HRGMv2_3289_1_834 884481 885599 + 3.A.1.105.4
Gene ID: HRGMv2_3289_1_828
Type: TC
Location: 876310 - 878409 (-)
Gene ID: HRGMv2_3289_1_829
Type: CAZyme
Location: 878631 - 879806 (+)
Gene ID: HRGMv2_3289_1_830
Type: STP
Location: 879803 - 880450 (-)
Gene ID: HRGMv2_3289_1_831
Type: TC
Location: 880569 - 881591 (+)
Gene ID: HRGMv2_3289_1_832
Type: TC
Location: 881584 - 883341 (+)
Gene ID: HRGMv2_3289_1_833
Type: TC
Location: 883352 - 884476 (+)
Gene ID: HRGMv2_3289_1_834
Type: TC
Location: 884481 - 885599 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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