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Cluster: HRGMv2_3289_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3289_16 HRGMv2_3289_16_10 7022 7978 - 2.A.109.1.7
TC HRGMv2_3289_16 HRGMv2_3289_16_11 8297 8893 - 9.B.105.1.3
pfam HRGMv2_3289_16 HRGMv2_3289_16_12 9029 10279 + LtrA
pfam HRGMv2_3289_16 HRGMv2_3289_16_13 10349 11722 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC HRGMv2_3289_16 HRGMv2_3289_16_14 11961 12326 + 2.A.7.34.1
pfam HRGMv2_3289_16 HRGMv2_3289_16_15 12510 13022 + AIRC
pfam HRGMv2_3289_16 HRGMv2_3289_16_16 13032 14153 + ATP-grasp | CPSase_L_D2 | PurK_C | RS_preATP-grasp-like
CAZyme HRGMv2_3289_16 HRGMv2_3289_16_17 14839 16131 + GH103
Gene ID: HRGMv2_3289_16_10
Type: TC
Location: 7022 - 7978 (-)
Gene ID: HRGMv2_3289_16_11
Type: TC
Location: 8297 - 8893 (-)
Gene ID: HRGMv2_3289_16_12
Type: pfam
Location: 9029 - 10279 (+)
Gene ID: HRGMv2_3289_16_13
Type: pfam
Location: 10349 - 11722 (-)
Gene ID: HRGMv2_3289_16_14
Type: TC
Location: 11961 - 12326 (+)
Gene ID: HRGMv2_3289_16_15
Type: pfam
Location: 12510 - 13022 (+)
Gene ID: HRGMv2_3289_16_16
Type: pfam
Location: 13032 - 14153 (+)
Gene ID: HRGMv2_3289_16_17
Type: CAZyme
Location: 14839 - 16131 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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