dbCAN Logo

Cluster: HRGMv2_3289_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3289_10 HRGMv2_3289_10_99 103527 105206 - 4.C.1.1.4
pfam HRGMv2_3289_10 HRGMv2_3289_10_100 105504 107723 - DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C
TC HRGMv2_3289_10 HRGMv2_3289_10_101 107877 109196 - 2.A.1.82.4
TC HRGMv2_3289_10 HRGMv2_3289_10_102 109279 109923 - 1.A.62.2.3
pfam HRGMv2_3289_10 HRGMv2_3289_10_103 109969 110436 - SEC-C | YchJ_M-like
TC HRGMv2_3289_10 HRGMv2_3289_10_104 110508 112100 - 2.A.109.2.3
pfam HRGMv2_3289_10 HRGMv2_3289_10_105 112427 113050 + Lysine_decarbox | LDcluster4
TC HRGMv2_3289_10 HRGMv2_3289_10_106 113259 114650 + 2.A.1.3.26
CAZyme HRGMv2_3289_10 HRGMv2_3289_10_107 114728 115486 + GH25
Gene ID: HRGMv2_3289_10_99
Type: TC
Location: 103527 - 105206 (-)
Gene ID: HRGMv2_3289_10_100
Type: pfam
Location: 105504 - 107723 (-)
Gene ID: HRGMv2_3289_10_101
Type: TC
Location: 107877 - 109196 (-)
Gene ID: HRGMv2_3289_10_102
Type: TC
Location: 109279 - 109923 (-)
Gene ID: HRGMv2_3289_10_103
Type: pfam
Location: 109969 - 110436 (-)
Gene ID: HRGMv2_3289_10_104
Type: TC
Location: 110508 - 112100 (-)
Gene ID: HRGMv2_3289_10_105
Type: pfam
Location: 112427 - 113050 (+)
Gene ID: HRGMv2_3289_10_106
Type: TC
Location: 113259 - 114650 (+)
Gene ID: HRGMv2_3289_10_107
Type: CAZyme
Location: 114728 - 115486 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List