dbCAN Logo

Cluster: HRGMv2_3289_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3289_10 HRGMv2_3289_10_68 68392 69702 + 2.A.4.4.7
STP HRGMv2_3289_10 HRGMv2_3289_10_69 69714 69974 + FeoA
TC HRGMv2_3289_10 HRGMv2_3289_10_70 69964 71793 + 9.A.8.1.4
pfam HRGMv2_3289_10 HRGMv2_3289_10_71 71865 72227 - CusF_Ec
TC HRGMv2_3289_10 HRGMv2_3289_10_72 72261 75407 - 2.A.6.1.4
TC HRGMv2_3289_10 HRGMv2_3289_10_73 75421 76920 - 2.A.6.1.4
pfam HRGMv2_3289_10 HRGMv2_3289_10_74 76920 78224 - OEP | OEP
NULL(UNKNOWN) HRGMv2_3289_10 HRGMv2_3289_10_75 78304 78765 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3289_10 HRGMv2_3289_10_76 78811 79731 - 1.B.76.1.2
CAZyme HRGMv2_3289_10 HRGMv2_3289_10_77 79718 81688 - AA1
Gene ID: HRGMv2_3289_10_68
Type: TC
Location: 68392 - 69702 (+)
Gene ID: HRGMv2_3289_10_69
Type: STP
Location: 69714 - 69974 (+)
Gene ID: HRGMv2_3289_10_70
Type: TC
Location: 69964 - 71793 (+)
Gene ID: HRGMv2_3289_10_71
Type: pfam
Location: 71865 - 72227 (-)
Gene ID: HRGMv2_3289_10_72
Type: TC
Location: 72261 - 75407 (-)
Gene ID: HRGMv2_3289_10_73
Type: TC
Location: 75421 - 76920 (-)
Gene ID: HRGMv2_3289_10_74
Type: pfam
Location: 76920 - 78224 (-)
Gene ID: HRGMv2_3289_10_75
Type:
Location: 78304 - 78765 (-)
Gene ID: HRGMv2_3289_10_76
Type: TC
Location: 78811 - 79731 (-)
Gene ID: HRGMv2_3289_10_77
Type: CAZyme
Location: 79718 - 81688 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List