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Cluster: HRGMv2_3289_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3289_7 HRGMv2_3289_7_31 29281 30822 + 2.A.66.4.5
pfam HRGMv2_3289_7 HRGMv2_3289_7_32 30868 31563 - FKBP_C | FKBP_N
pfam HRGMv2_3289_7 HRGMv2_3289_7_33 31613 32335 - FKBP_C | FKBP_N
TC HRGMv2_3289_7 HRGMv2_3289_7_34 32529 34724 - 8.A.3.3.3
pfam HRGMv2_3289_7 HRGMv2_3289_7_35 34746 35174 - LMWPc
TC HRGMv2_3289_7 HRGMv2_3289_7_36 35176 36318 - 1.B.18.3.1
pfam HRGMv2_3289_7 HRGMv2_3289_7_37 36481 37758 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam HRGMv2_3289_7 HRGMv2_3289_7_38 37761 39050 + Polysacc_synt_3
CAZyme HRGMv2_3289_7 HRGMv2_3289_7_39 39050 39997 + GT2
pfam HRGMv2_3289_7 HRGMv2_3289_7_40 40004 41386 + O-ag_pol_Wzy
CAZyme HRGMv2_3289_7 HRGMv2_3289_7_41 41391 42332 + GT2
CAZyme HRGMv2_3289_7 HRGMv2_3289_7_42 42336 43370 + GT4
CAZyme HRGMv2_3289_7 HRGMv2_3289_7_43 43377 44204 + GT2
TC HRGMv2_3289_7 HRGMv2_3289_7_44 44217 44837 + 9.B.18.1.2
Gene ID: HRGMv2_3289_7_31
Type: TC
Location: 29281 - 30822 (+)
Gene ID: HRGMv2_3289_7_32
Type: pfam
Location: 30868 - 31563 (-)
Gene ID: HRGMv2_3289_7_33
Type: pfam
Location: 31613 - 32335 (-)
Gene ID: HRGMv2_3289_7_34
Type: TC
Location: 32529 - 34724 (-)
Gene ID: HRGMv2_3289_7_35
Type: pfam
Location: 34746 - 35174 (-)
Gene ID: HRGMv2_3289_7_36
Type: TC
Location: 35176 - 36318 (-)
Gene ID: HRGMv2_3289_7_37
Type: pfam
Location: 36481 - 37758 (+)
Gene ID: HRGMv2_3289_7_38
Type: pfam
Location: 37761 - 39050 (+)
Gene ID: HRGMv2_3289_7_39
Type: CAZyme
Location: 39050 - 39997 (+)
Gene ID: HRGMv2_3289_7_40
Type: pfam
Location: 40004 - 41386 (+)
Gene ID: HRGMv2_3289_7_41
Type: CAZyme
Location: 41391 - 42332 (+)
Gene ID: HRGMv2_3289_7_42
Type: CAZyme
Location: 42336 - 43370 (+)
Gene ID: HRGMv2_3289_7_43
Type: CAZyme
Location: 43377 - 44204 (+)
Gene ID: HRGMv2_3289_7_44
Type: TC
Location: 44217 - 44837 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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