Cluster: HRGMv2_3289_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3289
- CGC Family ID: CGCFAM_02210
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3289_5 | HRGMv2_3289_5_153 | 166441 | 167733 | + | GT30 |
| pfam | HRGMv2_3289_5 | HRGMv2_3289_5_154 | 167730 | 168437 | + | Methyltrans_RNA |
| TC | HRGMv2_3289_5 | HRGMv2_3289_5_155 | 168417 | 169397 | - | 1.A.23.1.3 |
| pfam | HRGMv2_3289_5 | HRGMv2_3289_5_156 | 169510 | 170085 | - | DUF805 |
| TC | HRGMv2_3289_5 | HRGMv2_3289_5_157 | 170380 | 172329 | + | 4.C.1.1.6 |
Gene ID: HRGMv2_3289_5_153
Type: CAZyme
Location: 166441 - 167733 (+)
Type: CAZyme
Location: 166441 - 167733 (+)
Gene ID: HRGMv2_3289_5_154
Type: pfam
Location: 167730 - 168437 (+)
Type: pfam
Location: 167730 - 168437 (+)
Gene ID: HRGMv2_3289_5_155
Type: TC
Location: 168417 - 169397 (-)
Type: TC
Location: 168417 - 169397 (-)
Gene ID: HRGMv2_3289_5_156
Type: pfam
Location: 169510 - 170085 (-)
Type: pfam
Location: 169510 - 170085 (-)
Gene ID: HRGMv2_3289_5_157
Type: TC
Location: 170380 - 172329 (+)
Type: TC
Location: 170380 - 172329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter baumannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.