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Cluster: HRGMv2_3289_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3289_4 HRGMv2_3289_4_257 294907 298905 - 4.C.1.1.7
NULL(UNKNOWN) HRGMv2_3289_4 HRGMv2_3289_4_258 299683 300042 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3289_4 HRGMv2_3289_4_259 300302 300796 - GreA_GreB | GreA_GreB_N
CAZyme HRGMv2_3289_4 HRGMv2_3289_4_260 301169 302281 + GH23
pfam HRGMv2_3289_4 HRGMv2_3289_4_261 302373 302756 - SCP2
pfam HRGMv2_3289_4 HRGMv2_3289_4_262 302963 303868 - ATP_bind_3
CAZyme HRGMv2_3289_4 HRGMv2_3289_4_263 304372 305235 + GH23
TC HRGMv2_3289_4 HRGMv2_3289_4_264 305493 306398 + 9.B.1.1.6
pfam HRGMv2_3289_4 HRGMv2_3289_4_265 306449 307024 - DUF4112
TC HRGMv2_3289_4 HRGMv2_3289_4_266 307097 310192 - 2.A.6.2.4
Gene ID: HRGMv2_3289_4_257
Type: TC
Location: 294907 - 298905 (-)
Gene ID: HRGMv2_3289_4_258
Type:
Location: 299683 - 300042 (+)
Gene ID: HRGMv2_3289_4_259
Type: pfam
Location: 300302 - 300796 (-)
Gene ID: HRGMv2_3289_4_260
Type: CAZyme
Location: 301169 - 302281 (+)
Gene ID: HRGMv2_3289_4_261
Type: pfam
Location: 302373 - 302756 (-)
Gene ID: HRGMv2_3289_4_262
Type: pfam
Location: 302963 - 303868 (-)
Gene ID: HRGMv2_3289_4_263
Type: CAZyme
Location: 304372 - 305235 (+)
Gene ID: HRGMv2_3289_4_264
Type: TC
Location: 305493 - 306398 (+)
Gene ID: HRGMv2_3289_4_265
Type: pfam
Location: 306449 - 307024 (-)
Gene ID: HRGMv2_3289_4_266
Type: TC
Location: 307097 - 310192 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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