Cluster: HRGMv2_3289_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3289
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3289_3 | HRGMv2_3289_3_145 | 165808 | 167094 | + | 2.A.23.1.1 |
| CAZyme | HRGMv2_3289_3 | HRGMv2_3289_3_146 | 167151 | 168251 | - | GT4 |
| pfam | HRGMv2_3289_3 | HRGMv2_3289_3_147 | 168517 | 169452 | - | Lip_A_acyltrans |
| TC | HRGMv2_3289_3 | HRGMv2_3289_3_148 | 169572 | 170204 | - | 2.A.76.1.10 |
| pfam | HRGMv2_3289_3 | HRGMv2_3289_3_149 | 170345 | 171352 | + | Acyl_transf_3 |
| TC | HRGMv2_3289_3 | HRGMv2_3289_3_150 | 171372 | 173282 | - | 3.A.1.120.6 |
Gene ID: HRGMv2_3289_3_145
Type: TC
Location: 165808 - 167094 (+)
Type: TC
Location: 165808 - 167094 (+)
Gene ID: HRGMv2_3289_3_146
Type: CAZyme
Location: 167151 - 168251 (-)
Type: CAZyme
Location: 167151 - 168251 (-)
Gene ID: HRGMv2_3289_3_147
Type: pfam
Location: 168517 - 169452 (-)
Type: pfam
Location: 168517 - 169452 (-)
Gene ID: HRGMv2_3289_3_148
Type: TC
Location: 169572 - 170204 (-)
Type: TC
Location: 169572 - 170204 (-)
Gene ID: HRGMv2_3289_3_149
Type: pfam
Location: 170345 - 171352 (+)
Type: pfam
Location: 170345 - 171352 (+)
Gene ID: HRGMv2_3289_3_150
Type: TC
Location: 171372 - 173282 (-)
Type: TC
Location: 171372 - 173282 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter baumannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.